Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014839.1 Corchorus olitorius cultivar O-4 contig14872, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18466

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1771--1884
58
2.0
57
82
1
138
35
14
17
32
1.91
4768--4819
25
2.1
24
85
3
68
30
9
3
55
1.50
5718--5764
25
1.9
24
95
4
85
55
8
6
29
1.55
5750--5814
17
3.5
17
71
18
58
36
4
9
49
1.56
5756--5816
18
3.2
18
66
20
52
34
4
8
52
1.53
6052--6147
6
15.8
6
88
1
138
46
1
16
35
1.54

Tables:   1

The End!