Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014842.1 Corchorus olitorius cultivar O-4 contig14875, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63703

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1313--1512
101
2.0
101
95
2
357
36
10
19
35
1.85
3492--3539
24
2.0
24
87
0
69
37
4
16
41
1.68
5113--5158
22
2.1
22
100
0
92
45
8
17
28
1.78
5149--5221
29
2.6
29
97
2
139
35
4
17
42
1.69
30629--30653
13
1.9
13
100
0
50
40
20
16
24
1.91
37225--37274
21
2.4
21
96
0
91
28
36
16
20
1.93
58616--58657
15
2.8
16
85
7
52
42
4
0
52
1.22
58613--58657
18
2.5
18
85
7
56
42
4
0
53
1.21
60041--60082
22
1.9
22
85
0
57
40
11
4
42
1.63

Tables:   1

The End!