Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014854.1 Corchorus olitorius cultivar O-4 contig14887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24201

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
523--547
13
1.9
13
100
0
50
20
0
0
80
0.72
1624--1710
42
2.1
42
100
0
174
48
11
20
19
1.80
12457--12515
18
3.2
18
77
15
66
16
8
18
55
1.66
12687--12724
2
19.0
2
100
0
76
50
0
0
50
1.00
13419--13589
36
4.8
36
84
2
202
30
15
18
36
1.91
13419--13617
72
2.8
71
80
4
222
29
13
20
37
1.91
18998--19049
25
2.1
25
96
0
95
36
26
3
32
1.75
19900--19940
21
1.9
22
85
5
57
43
29
17
9
1.80

Tables:   1

The End!