Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014859.1 Corchorus olitorius cultivar O-4 contig14892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31122

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9388--9482
27
3.6
27
91
4
140
37
23
20
18
1.94
16539--16633
49
1.9
49
97
0
181
52
22
6
18
1.68
24716--24763
20
2.4
20
79
6
53
4
12
37
45
1.61
24799--24911
11
10.8
11
74
7
94
44
2
0
53
1.14
24803--24913
41
2.7
42
78
10
120
45
2
0
52
1.15
24802--24858
9
5.8
9
77
18
60
40
1
0
57
1.09
25295--25345
20
2.6
20
96
3
95
19
21
0
58
1.39
30334--30394
32
1.9
32
89
0
95
27
18
6
47
1.73

Tables:   1

The End!