Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014864.1 Corchorus olitorius cultivar O-4 contig14897, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17012

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5441--5484
16
3.0
14
87
12
54
61
18
9
11
1.55
8240--8283
21
2.2
20
83
4
52
68
6
0
25
1.14
10519--10560
15
2.7
15
96
3
75
11
7
14
66
1.43
10829--10853
11
2.3
11
100
0
50
68
8
16
8
1.38
12411--12442
2
16.5
2
93
6
57
46
0
0
53
1.00
12700--12761
31
2.0
31
81
6
72
41
0
6
51
1.27
12707--12777
16
4.5
15
74
8
52
40
0
4
54
1.20
16759--16814
16
3.6
16
82
2
69
8
14
39
37
1.77

Tables:   1

The End!