Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014869.1 Corchorus olitorius cultivar O-4 contig14902, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14014

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1139--1170
15
2.1
15
100
0
64
50
28
6
15
1.68
1768--1896
33
3.9
32
73
8
100
26
7
22
43
1.80
1756--1882
66
1.9
66
83
3
166
25
7
23
42
1.81
10908--11004
32
3.0
32
87
3
124
31
17
19
30
1.95
11737--11803
15
4.7
15
76
10
77
34
5
29
29
1.81
11748--11799
27
1.9
27
100
0
104
30
3
30
34
1.76

Tables:   1

The End!