Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014872.1 Corchorus olitorius cultivar O-4 contig14905, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32036

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
364--410
24
2.0
24
84
12
62
53
21
0
25
1.46
1093--1145
19
2.6
20
82
11
63
52
1
0
45
1.11
1203--1338
69
2.0
69
88
2
202
21
13
30
35
1.91
1639--1672
15
2.3
15
90
5
52
47
5
20
26
1.73
2275--2410
69
2.0
68
89
4
211
34
11
22
31
1.90
2979--3026
18
2.7
18
87
3
71
62
0
0
37
0.95
2979--3027
25
2.0
25
87
0
71
63
0
0
36
0.95
4481--4513
11
3.0
11
100
0
66
18
0
36
45
1.49
13734--13817
41
2.0
41
100
0
168
13
14
26
46
1.81
13858--13896
19
2.1
19
85
4
53
7
23
12
56
1.62
22797--22830
17
2.0
17
100
0
68
17
35
17
29
1.93
24836--24901
31
2.2
30
81
10
73
31
13
13
40
1.84
27609--27639
2
15.5
2
100
0
62
51
0
48
0
1.00

Tables:   1

The End!