Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014874.1 Corchorus olitorius cultivar O-4 contig14907, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67776

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2720--2789
36
1.9
36
91
0
113
37
10
18
34
1.84
5889--5946
19
2.9
19
82
5
71
32
18
12
36
1.88
8031--8081
26
2.0
26
88
0
75
39
21
1
37
1.65
8598--8624
9
3.0
9
100
0
54
11
11
44
33
1.75
20735--20760
6
4.3
6
100
0
52
84
0
0
15
0.62
22136--22217
25
3.2
25
73
23
82
43
4
8
42
1.56
28879--28907
13
2.1
14
93
6
51
89
0
10
0
0.48
46791--47311
186
2.9
180
91
4
836
27
15
10
46
1.79
47642--47675
17
2.0
17
94
0
59
50
0
5
44
1.26
47930--47986
25
2.4
24
85
5
71
61
3
5
29
1.35
51946--51992
14
3.4
14
79
5
51
76
0
17
6
0.98
52410--52435
5
5.2
5
100
0
52
61
0
38
0
0.96
56542--56571
2
15.0
2
92
0
51
0
46
0
53
1.00
57594--57664
29
2.4
29
97
0
133
50
8
4
36
1.52
60194--60218
13
1.9
13
100
0
50
0
8
0
92
0.40

Tables:   1

The End!