Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014878.1 Corchorus olitorius cultivar O-4 contig14911, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28886

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5971--6034
20
3.2
20
97
0
119
15
15
25
43
1.86
14847--14898
5
10.4
5
84
12
54
38
5
0
55
1.24
14847--14898
16
3.5
15
79
15
54
38
5
0
55
1.24
15027--15079
26
2.0
27
85
10
74
43
5
0
50
1.25
16750--16869
59
2.0
59
100
0
240
30
16
15
37
1.90
17241--17329
45
2.0
45
90
0
142
35
4
21
38
1.74
19456--19584
45
2.9
45
96
0
240
34
6
21
37
1.81
22627--22676
18
2.8
18
93
0
73
34
16
14
36
1.88
22922--22972
24
2.2
23
85
3
66
74
3
3
17
1.12
23651--23683
16
2.1
16
88
11
50
66
6
0
27
1.15
28265--28295
15
2.1
15
100
0
62
38
12
25
22
1.90

Tables:   1

The End!