Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014880.1 Corchorus olitorius cultivar O-4 contig14913, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5744

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--50
11
4.1
11
91
2
74
60
8
4
26
1.44
452--684
22
10.6
22
72
8
134
33
15
11
39
1.84
430--682
44
5.7
44
75
11
167
32
16
11
38
1.85
453--626
66
2.6
65
81
7
181
33
15
10
40
1.82
518--684
66
2.5
66
78
7
160
31
14
13
40
1.85
4366--4473
22
5.0
21
79
8
101
37
18
9
35
1.83
4461--4486
13
2.0
13
100
0
52
38
15
7
38
1.76

Tables:   1

The End!