Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014883.1 Corchorus olitorius cultivar O-4 contig14916, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57706

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1830--1883
22
2.3
24
81
12
60
24
22
5
48
1.72
5204--5411
62
3.3
62
93
4
341
30
16
16
36
1.91
5770--5828
22
2.5
24
78
15
61
23
22
5
49
1.70
6161--6239
15
5.5
15
71
15
60
53
12
0
34
1.39
6161--6236
16
5.2
16
73
19
69
53
13
0
32
1.39
6166--6246
41
2.0
41
95
0
144
51
13
0
34
1.41
6179--6233
25
2.1
26
86
6
76
54
14
0
30
1.41
6161--6246
16
5.9
15
71
17
65
52
12
0
34
1.40
45655--45684
12
2.5
12
94
0
51
3
13
30
53
1.56
47565--47613
24
2.0
24
92
0
80
28
20
12
38
1.89
51472--51545
27
2.8
26
73
4
69
37
33
4
24
1.74

Tables:   1

The End!