Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014909.1 Corchorus olitorius cultivar O-4 contig14942, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46855

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
264--1508
639
1.9
635
81
6
1487
35
17
14
33
1.90
1625--1788
80
2.1
77
92
5
269
18
15
18
47
1.83
3232--3259
14
2.0
14
100
0
56
35
7
21
35
1.81
10305--10357
17
3.1
17
78
8
54
33
5
0
60
1.20
23937--24084
76
1.9
76
86
2
208
32
26
15
25
1.95

Tables:   1

The End!