Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014913.1 Corchorus olitorius cultivar O-4 contig14946, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42259

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21548--21572
2
12.5
2
100
0
50
52
0
0
48
1.00
34329--34516
71
2.6
72
88
0
288
12
19
11
56
1.66
39572--39688
60
2.0
59
94
1
207
25
16
27
30
1.96
39843--39901
30
2.0
30
93
0
100
22
20
11
45
1.83
40996--42259
322
3.9
318
77
10
1020
35
15
14
34
1.89

Tables:   1

The End!