Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014921.1 Corchorus olitorius cultivar O-4 contig14954, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33562

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--1209
330
3.7
331
90
3
1812
33
14
16
35
1.89
698--1756
545
1.9
546
89
2
1626
34
15
16
33
1.90
1241--2964
329
5.2
329
85
5
1818
31
16
17
35
1.92
3262--3309
24
2.0
24
100
0
96
29
12
16
41
1.85
3290--4129
326
2.6
323
80
8
889
30
15
17
35
1.91
11368--11398
9
3.4
9
90
0
53
45
25
6
22
1.76
11479--11999
261
2.0
261
93
0
889
25
22
22
30
1.99
33529--33561
1
33.0
1
100
0
66
0
0
0
100
0.00

Tables:   1

The End!