Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014923.1 Corchorus olitorius cultivar O-4 contig14956, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48820

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81--1807
334
5.2
332
86
3
2417
34
17
14
32
1.91
2653--3122
239
2.0
241
85
5
639
37
15
11
35
1.84
4142--4167
13
2.0
13
100
0
52
30
15
15
38
1.88
21516--21547
2
16.0
2
100
0
64
50
0
0
50
1.00
28595--28652
19
2.9
19
79
5
62
34
17
8
39
1.80
39218--39248
1
31.0
1
100
0
62
0
0
0
100
0.00
39570--39598
2
14.5
2
100
0
58
0
48
0
51
1.00
45753--45792
21
1.9
21
89
0
62
37
10
17
35
1.83
46144--46170
4
6.8
4
100
0
54
25
0
0
74
0.83

Tables:   1

The End!