Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014929.1 Corchorus olitorius cultivar O-4 contig14962, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89678

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8624--8659
17
2.1
17
89
0
54
47
0
19
33
1.50
8991--9046
27
2.0
28
86
3
78
44
16
17
21
1.86
9069--9096
14
2.0
14
100
0
56
42
14
7
35
1.73
16658--16691
2
17.0
2
100
0
68
50
0
0
50
1.00
24363--24414
18
2.8
18
74
11
52
11
11
17
59
1.60
26673--26702
15
2.0
15
93
0
51
6
20
30
43
1.77
33842--37556
335
11.3
330
79
7
3660
33
14
16
35
1.90
37581--38618
322
3.2
321
78
10
1189
33
14
16
35
1.89
38770--38847
39
2.0
40
89
2
122
33
7
12
46
1.71
41171--41306
68
2.0
68
100
0
272
30
25
14
29
1.95
48458--48594
45
3.0
45
92
2
213
23
24
20
31
1.98
72446--72479
14
2.6
13
90
9
52
73
0
26
0
0.83
88676--88712
19
1.9
19
88
0
56
40
10
18
29
1.85

Tables:   1

The End!