Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014930.1 Corchorus olitorius cultivar O-4 contig14963, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39785

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18640--18672
2
16.5
2
100
0
66
48
0
0
51
1.00
27795--27819
4
6.2
4
100
0
50
0
24
0
76
0.80
28692--28721
6
5.2
6
92
8
53
0
13
0
86
0.57
30142--30167
13
2.0
13
100
0
52
46
30
15
7
1.74
30504--30530
6
4.5
6
100
0
54
44
0
18
37
1.50
37210--37246
19
1.9
19
94
0
65
37
10
24
27
1.88
38311--38356
2
23.5
2
93
4
76
45
0
0
54
0.99
38641--39785
334
3.4
334
92
2
1876
34
17
14
32
1.91

Tables:   1

The End!