Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014932.1 Corchorus olitorius cultivar O-4 contig14965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50423

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7712--7887
90
2.0
90
93
0
298
39
12
17
30
1.86
11062--11093
2
16.0
2
100
0
64
50
50
0
0
1.00
15954--16101
71
2.1
71
98
1
289
45
18
9
26
1.79
16303--16456
77
2.0
77
92
0
254
48
14
18
18
1.81
21126--21161
18
2.0
18
100
0
72
27
16
22
33
1.95
21962--21993
15
2.1
15
100
0
64
28
12
12
46
1.78
25117--25147
16
1.9
16
100
0
62
32
25
22
19
1.97
25407--25452
16
2.8
17
77
9
51
52
0
0
47
1.00
33069--33110
21
2.0
21
81
9
50
11
35
11
40
1.79
37214--37243
7
4.3
7
100
0
60
86
0
13
0
0.57

Tables:   1

The End!