Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014935.1 Corchorus olitorius cultivar O-4 contig14968, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5931

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2580--2799
122
1.8
122
90
2
361
13
21
21
43
1.87
2864--2930
20
3.3
20
72
2
71
32
8
26
31
1.87
2903--3264
32
11.1
32
91
5
559
30
8
25
34
1.86
3034--3098
20
3.2
20
71
2
67
32
7
27
32
1.85
2866--3233
168
2.2
168
98
0
709
30
8
26
34
1.85
3699--3736
17
2.2
17
100
0
76
7
5
28
57
1.49
5876--5904
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!