Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014960.1 Corchorus olitorius cultivar O-4 contig14993, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33599

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8083--8133
25
2.0
25
100
0
102
39
7
15
37
1.77
13346--13381
19
1.9
18
88
5
54
41
8
22
27
1.82
13334--13393
30
2.0
30
83
6
77
41
8
18
31
1.80
29314--29361
19
2.6
18
83
9
60
60
0
2
37
1.09
29754--29938
95
1.9
96
91
3
302
27
13
28
30
1.94
32197--32247
24
2.1
24
88
0
75
15
17
17
49
1.81
32197--32253
24
2.4
24
84
0
60
14
19
15
50
1.77
33181--33252
31
2.3
31
85
4
101
52
23
8
15
1.69
33266--33295
12
2.5
12
94
0
51
3
20
33
43
1.68

Tables:   1

The End!