Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014961.1 Corchorus olitorius cultivar O-4 contig14994, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67765

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1112--1181
32
2.2
32
87
7
99
21
8
17
52
1.70
1595--1641
3
15.7
3
100
0
94
65
0
0
34
0.93
1871--1932
2
31.5
2
86
3
90
48
0
1
50
1.10
8622--8736
57
2.0
56
96
1
212
32
27
1
38
1.67
8802--8882
42
1.9
42
94
0
144
30
7
14
46
1.72
26954--27045
21
4.4
21
90
5
125
29
18
25
27
1.98
31762--31811
24
2.1
24
85
10
68
12
34
6
48
1.65
35704--35833
42
3.1
42
79
2
143
34
16
2
46
1.60
35705--35835
43
3.0
43
80
2
147
35
16
2
45
1.59
38728--38768
21
2.0
21
90
0
64
34
7
24
34
1.83
38771--38820
22
2.3
23
79
10
59
12
24
24
40
1.88
55971--56008
20
1.9
20
88
0
58
18
23
23
34
1.96
55989--56124
53
2.6
53
89
2
202
16
16
30
37
1.90
57220--57266
26
1.9
24
87
12
69
27
27
4
40
1.75
57719--57759
21
2.0
21
85
9
57
34
9
26
29
1.88
64618--64879
131
2.0
132
87
5
379
37
9
2
51
1.48
66025--66064
2
20.0
2
90
10
64
50
2
0
47
1.14
66058--66102
16
2.9
15
80
6
54
51
11
0
37
1.38
66847--66888
22
1.9
22
85
0
57
16
19
21
42
1.89

Tables:   1

The End!