Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014964.1 Corchorus olitorius cultivar O-4 contig14997, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9962

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248--283
17
2.1
17
94
0
63
2
0
19
77
0.88
1383--1412
15
2.0
15
100
0
60
6
20
40
33
1.78
1551--1659
27
4.0
27
86
4
139
25
25
18
30
1.98
2224--2343
22
5.4
22
66
25
81
31
26
7
34
1.84
2204--2729
45
11.6
45
91
4
785
30
27
8
32
1.87
2204--2731
91
5.8
91
92
2
827
30
27
8
32
1.87
6155--6194
18
2.2
18
90
0
62
7
55
12
25
1.63
8043--8080
15
2.5
15
95
0
67
13
31
15
39
1.86
9738--9846
27
4.0
27
87
0
137
26
23
19
30
1.98

Tables:   1

The End!