Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014970.1 Corchorus olitorius cultivar O-4 contig15003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44389

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4508--4547
15
2.6
16
92
4
64
12
10
12
65
1.49
5008--5063
28
2.0
28
89
0
85
41
5
10
42
1.62
8760--8799
21
1.9
21
84
0
53
65
10
7
17
1.46
10032--10089
31
1.9
29
82
6
71
15
17
12
55
1.70
11246--11329
44
1.9
44
82
4
107
15
30
35
17
1.91
16668--16908
29
8.4
29
86
1
306
19
14
21
43
1.87
19604--19634
16
2.0
16
93
6
55
45
0
22
32
1.53
33781--33852
34
2.1
34
100
0
144
38
2
29
29
1.71
34148--34204
30
1.9
30
85
7
80
43
5
17
33
1.71
35534--35604
21
3.4
21
94
3
117
28
18
26
26
1.98
36474--36520
26
1.9
24
87
12
69
27
27
4
40
1.75
39997--40067
21
3.4
21
94
3
117
28
18
26
26
1.98

Tables:   1

The End!