Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014971.1 Corchorus olitorius cultivar O-4 contig15004, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36805

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
379--444
30
2.2
29
84
7
80
36
16
6
40
1.73
4416--4457
13
3.2
13
86
0
57
64
9
4
21
1.42
5474--5516
21
2.1
20
95
4
77
27
25
13
32
1.94
12293--12397
33
3.2
33
78
8
97
45
20
8
25
1.79
15217--15259
21
2.1
20
95
4
77
27
27
13
30
1.95
16114--16162
25
2.0
25
84
8
64
30
28
22
18
1.97
21367--21428
26
2.4
26
86
0
88
8
50
9
32
1.65
25225--25256
2
16.0
2
100
0
64
50
0
0
50
1.00
25580--25647
34
2.1
33
91
5
111
29
10
11
48
1.73
26003--26068
3
21.7
3
85
11
82
65
1
0
33
1.02
28585--28622
2
19.5
2
89
5
51
50
5
0
44
1.24
36623--36659
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!