Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014977.1 Corchorus olitorius cultivar O-4 contig15010, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10899

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--1210
334
3.6
328
79
6
1165
33
13
15
37
1.88
2253--2478
119
1.9
118
86
2
319
30
17
13
38
1.89
3101--3164
25
2.5
25
74
5
65
31
29
14
25
1.94
6973--7173
106
1.9
105
88
3
305
37
23
8
29
1.86
7819--7862
12
3.7
13
80
14
51
0
38
0
61
0.96

Tables:   1

The End!