Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014979.1 Corchorus olitorius cultivar O-4 contig15012, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15729

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
155--409
131
2.0
127
89
6
392
49
1
11
36
1.50
161--417
123
2.0
127
85
7
335
50
1
11
36
1.50
633--741
56
1.9
56
96
0
200
44
13
7
33
1.72
8474--8641
83
2.0
84
98
1
329
38
19
7
35
1.79
14180--14509
41
7.8
42
87
6
461
20
11
26
41
1.86
14178--14509
84
3.9
84
94
2
560
21
11
26
40
1.86
14695--15453
338
2.3
324
82
8
904
36
16
15
31
1.90

Tables:   1

The End!