Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014980.1 Corchorus olitorius cultivar O-4 contig15013, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70729

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4253--4303
27
1.9
26
84
11
68
0
21
7
70
1.12
17519--17670
72
2.1
73
95
2
279
37
9
13
38
1.78
25170--25201
16
2.0
16
93
0
55
28
6
34
31
1.82
26184--26209
2
13.0
2
100
0
52
50
0
0
50
1.00
33843--33893
17
3.1
16
86
8
66
21
21
21
35
1.96
41838--41884
24
2.0
24
100
0
94
27
12
12
46
1.78
58299--58392
47
2.0
47
91
0
152
31
15
15
36
1.90
64419--64445
14
1.9
14
100
0
54
77
0
22
0
0.76
66726--66761
1
36.0
1
100
0
72
100
0
0
0
0.00
67273--67305
5
6.8
5
86
6
50
36
0
3
60
1.12
67267--67305
10
3.9
10
86
10
53
33
2
5
58
1.33

Tables:   1

The End!