Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014984.1 Corchorus olitorius cultivar O-4 contig15017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22023

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3330--3384
25
2.2
25
83
6
67
41
0
0
58
0.98
3736--3767
13
2.5
13
94
0
55
28
18
25
28
1.98
4337--4381
22
2.0
22
91
0
72
17
24
37
20
1.93
4788--4824
2
19.0
2
94
5
67
48
0
0
51
1.00
7835--7872
11
3.5
11
85
10
51
57
2
0
39
1.12
9890--9939
10
4.9
10
92
2
82
64
10
26
0
1.25
11466--11860
146
2.7
142
79
6
382
30
20
12
37
1.89
14063--14240
87
2.0
91
83
6
231
31
19
11
38
1.87
14263--14287
3
8.3
3
100
0
50
32
0
0
68
0.90
15734--15763
1
30.0
1
100
0
60
0
0
0
100
0.00
17141--17302
31
5.4
31
65
14
113
34
19
17
27
1.95
17145--17302
60
2.6
60
93
0
271
35
19
17
27
1.94
17380--17480
29
3.4
29
67
15
89
27
18
18
34
1.95
17349--17511
60
2.7
60
89
3
240
26
17
19
36
1.94
17412--17515
31
3.4
30
73
15
106
27
19
16
36
1.93

Tables:   1

The End!