Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014990.1 Corchorus olitorius cultivar O-4 contig15023, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35247

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3179--3215
18
2.1
18
100
0
74
27
21
27
24
1.99
3785--3810
2
13.0
2
100
0
52
50
0
0
50
1.00
9642--9691
22
2.4
22
86
6
77
48
16
2
34
1.57
9894--10275
192
2.0
192
98
0
746
30
18
20
29
1.97
14530--14576
21
2.2
21
96
0
85
25
8
55
10
1.62
14538--14583
21
2.2
21
96
0
83
28
8
54
8
1.61
14542--14582
12
3.7
12
75
18
52
24
9
56
9
1.62
17536--17565
2
15.0
2
100
0
60
50
50
0
0
1.00
19269--19961
178
3.9
178
97
0
1282
35
21
15
26
1.94
19269--19961
355
1.9
357
96
1
1284
35
21
15
26
1.94

Tables:   1

The End!