Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014994.1 Corchorus olitorius cultivar O-4 contig15027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21356

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
364--428
20
3.2
21
79
16
66
63
4
10
21
1.45
4577--4623
22
2.1
22
84
7
60
61
2
12
23
1.42
4500--4683
93
2.0
93
91
0
296
51
2
12
33
1.54
4695--4756
31
2.0
31
90
0
97
43
6
17
32
1.75
5294--5318
4
6.2
4
100
0
50
76
0
0
24
0.80
7557--7598
22
1.9
22
85
0
57
14
16
26
42
1.86
14011--14041
1
31.0
1
100
0
62
100
0
0
0
0.00
18542--18570
14
2.1
14
100
0
58
41
13
0
44
1.44

Tables:   1

The End!