Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014999.1 Corchorus olitorius cultivar O-4 contig15032, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7687

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
698--1495
35
22.9
36
85
5
936
26
20
20
32
1.97
1513--1696
50
3.7
50
91
1
289
29
15
27
27
1.96
2298--2445
50
3.0
50
83
4
190
38
13
15
32
1.86
3031--3074
6
7.7
6
87
12
58
15
0
13
70
1.17
3032--3074
17
2.5
18
85
11
63
16
0
13
69
1.19
3496--3539
22
2.0
21
87
12
63
11
13
0
75
1.06
3499--3540
15
2.8
15
79
10
50
11
16
0
71
1.14
4644--4726
42
2.0
42
85
0
112
40
12
24
22
1.88

Tables:   1

The End!