Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015003.1 Corchorus olitorius cultivar O-4 contig15036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18162

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
277--307
11
2.8
11
90
0
53
9
22
38
29
1.86
1516--1571
5
10.6
5
96
3
85
42
0
0
57
0.99
1518--1570
2
29.5
2
78
21
64
43
0
0
56
0.99
2406--2768
182
2.0
182
97
0
681
35
19
16
28
1.94
6283--6308
13
2.0
13
100
0
52
61
7
7
23
1.49
12630--12731
45
2.3
44
83
11
120
40
15
16
27
1.89
12756--13012
118
2.2
119
87
6
380
30
16
16
36
1.91
12656--13012
41
8.8
41
78
12
348
32
15
15
35
1.90
15048--15077
13
2.3
13
94
0
51
40
6
16
36
1.75

Tables:   1

The End!