Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015004.1 Corchorus olitorius cultivar O-4 contig15037, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28361

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8912--8942
2
15.5
2
100
0
62
51
0
0
48
1.00
10956--11017
30
2.1
30
96
0
115
25
24
4
45
1.73
13084--13150
32
2.0
34
88
5
102
52
8
20
17
1.72
24864--24993
49
2.7
48
83
8
149
50
6
13
30
1.66

Tables:   1

The End!