Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015012.1 Corchorus olitorius cultivar O-4 contig15045, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9008

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1990--2035
19
2.3
20
85
7
67
56
13
0
30
1.37
3360--3404
12
3.8
12
84
0
54
35
0
55
8
1.31
3366--3404
3
13.0
3
83
0
51
35
0
58
5
1.20
3577--3673
48
2.0
48
91
0
158
29
32
18
18
1.95
3695--3724
15
2.0
15
100
0
60
20
33
33
13
1.91

Tables:   1

The End!