Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015013.1 Corchorus olitorius cultivar O-4 contig15046, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12788

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1331--1409
30
2.6
30
93
0
131
27
24
10
37
1.87
1535--1610
30
2.6
30
89
6
111
42
13
25
19
1.87
2633--2659
4
6.8
4
100
0
54
25
0
0
74
0.83
3281--3363
43
1.9
43
95
0
148
31
7
20
40
1.79
6794--6833
16
2.4
17
84
15
57
0
10
2
87
0.63

Tables:   1

The End!