Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015014.1 Corchorus olitorius cultivar O-4 contig15047, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14425

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48--130
39
2.1
39
82
8
98
4
39
38
16
1.70
2057--2094
20
1.9
20
94
0
67
50
7
7
34
1.61
7292--7321
12
2.4
12
94
5
51
50
20
23
6
1.71
12155--12202
6
7.8
6
90
2
69
37
10
0
52
1.36
12309--12631
114
2.8
114
90
5
476
39
9
3
47
1.53
12603--12650
15
2.9
16
84
12
53
41
4
2
52
1.32
12600--12650
18
2.8
17
85
8
57
41
3
1
52
1.31
14028--14069
22
1.9
22
90
0
66
38
11
7
42
1.69
14033--14081
22
2.2
22
85
7
64
34
12
6
46
1.66

Tables:   1

The End!