Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015021.1 Corchorus olitorius cultivar O-4 contig15054, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35804

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1087--1131
22
2.0
22
82
0
54
28
2
8
60
1.39
6028--6154
65
2.0
64
87
1
182
43
22
11
22
1.85
6121--6334
21
10.1
21
89
0
293
36
22
13
27
1.92
7680--7719
3
13.7
3
84
5
55
60
0
5
35
1.19
7944--7982
15
2.5
16
83
8
53
0
23
0
76
0.78
8203--8289
29
2.9
30
79
3
86
36
16
17
29
1.91
15644--16142
261
1.9
261
88
1
750
36
15
15
32
1.89
35332--35383
23
2.2
24
89
6
88
34
21
23
21
1.97

Tables:   1

The End!