Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015022.1 Corchorus olitorius cultivar O-4 contig15055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39043

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9544--9672
64
2.0
66
84
6
174
25
11
10
52
1.68
13056--13096
19
2.2
19
100
0
82
17
4
39
39
1.71
13722--13765
3
14.7
3
100
0
88
34
0
0
65
0.93
14399--14425
2
13.5
2
100
0
54
48
0
0
51
1.00
20814--20853
15
2.6
16
88
4
55
62
12
10
15
1.54
21609--21654
18
2.6
18
100
0
92
67
10
10
10
1.43
27030--27076
18
2.6
18
93
0
76
25
25
6
42
1.78
38483--38533
3
16.7
3
95
4
93
33
0
0
66
0.92
38869--38923
28
2.0
28
85
0
74
30
10
10
47
1.73

Tables:   1

The End!