Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015024.1 Corchorus olitorius cultivar O-4 contig15057, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15052

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--48
2
21.0
2
100
0
84
50
0
0
50
1.00
317--355
18
2.1
19
85
4
53
15
5
17
61
1.51
387--431
15
2.9
15
80
6
54
48
15
0
35
1.45
1065--1092
2
14.0
2
100
0
56
50
0
0
50
1.00
1192--1232
14
3.1
14
79
10
50
26
0
7
65
1.18
1420--1461
16
2.6
16
85
7
50
2
33
4
59
1.31
12202--12524
125
2.6
125
83
1
378
32
15
14
37
1.88
12340--12584
125
2.0
125
81
0
292
34
15
12
37
1.85
14141--14395
125
2.0
127
90
7
401
37
10
1
50
1.47
14381--14419
14
2.9
13
80
3
51
41
2
2
53
1.28

Tables:   1

The End!