Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015027.1 Corchorus olitorius cultivar O-4 contig15060, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38169

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3550--3612
32
2.0
32
87
6
92
41
17
11
30
1.84
16602--16644
22
2.0
22
86
9
61
20
2
13
62
1.42
16664--16725
27
2.3
27
81
18
67
46
1
1
50
1.20
16674--16719
22
2.2
20
84
7
56
45
2
2
50
1.26
22443--22662
109
2.0
109
88
3
327
26
20
22
30
1.98
29967--30018
16
3.3
16
72
5
61
65
1
3
28
1.21
29984--30032
14
3.4
14
72
10
53
59
4
2
34
1.28
29959--30035
30
2.5
31
97
2
147
59
3
2
33
1.29
32121--32216
48
2.0
48
93
4
167
21
14
22
40
1.90

Tables:   1

The End!