Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015032.1 Corchorus olitorius cultivar O-4 contig15065, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31451

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2763--3270
145
3.7
141
78
10
537
45
10
11
32
1.75
3007--3256
131
1.9
127
86
3
356
45
12
10
31
1.77
3141--3622
165
2.9
162
88
4
685
45
10
10
33
1.73
3526--3851
174
1.9
174
86
1
474
44
10
11
33
1.75
5341--5429
15
5.7
15
68
15
63
23
28
21
26
1.99
5327--5423
33
3.0
32
90
3
142
25
26
18
28
1.98
18929--19095
31
5.4
31
84
0
190
31
23
23
20
1.98
25672--25731
30
2.0
30
96
0
111
30
25
0
45
1.54
30636--30718
30
3.0
27
84
10
121
50
3
3
42
1.37

Tables:   1

The End!