Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015046.1 Corchorus olitorius cultivar O-4 contig15079, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17096

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
620--863
101
2.4
101
93
0
416
25
28
11
35
1.90
620--862
51
4.8
51
93
1
400
25
27
11
35
1.90
1092--1705
64
9.6
64
87
0
798
28
21
16
33
1.95
1092--1703
192
3.2
192
89
0
913
28
22
16
33
1.95
1676--1837
55
2.9
55
89
1
245
28
26
12
32
1.93
1782--2112
67
4.9
67
92
0
500
24
25
14
35
1.94
10923--10947
13
1.9
13
100
0
50
56
28
0
16
1.41

Tables:   1

The End!