Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015047.1 Corchorus olitorius cultivar O-4 contig15080, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1888

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--621
154
4.0
154
90
1
938
40
18
18
23
1.91
587--657
36
2.0
36
100
0
142
36
21
11
30
1.88
438--805
190
1.9
190
89
2
569
40
17
17
24
1.91
627--1455
154
5.4
154
89
2
1265
39
17
19
23
1.92
279--965
344
2.0
344
89
1
1045
39
18
18
24
1.92

Tables:   1

The End!