Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015066.1 Corchorus olitorius cultivar O-4 contig15099, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37401

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16347--16388
6
7.0
6
100
0
84
83
0
16
0
0.65
18770--18810
21
2.0
21
90
0
64
53
21
12
12
1.70
21151--21234
37
2.3
37
85
4
107
35
19
15
29
1.92
26443--26502
27
2.2
27
96
0
111
41
8
3
46
1.50
27277--27301
4
6.2
4
100
0
50
48
0
0
52
1.00
30144--30176
17
1.9
17
100
0
66
54
3
12
30
1.52
31728--31861
65
2.0
66
97
1
252
29
13
14
42
1.84
32425--32476
26
2.0
26
100
0
104
46
23
7
23
1.78
36727--36798
31
2.3
31
100
0
144
26
26
11
36
1.90

Tables:   1

The End!