Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015069.1 Corchorus olitorius cultivar O-4 contig15102, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45586

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32--216
101
1.8
100
83
4
246
45
6
6
41
1.55
4777--4999
84
2.6
87
85
7
319
17
34
13
34
1.88
4931--5071
72
2.0
72
88
5
214
15
36
14
34
1.88
4998--5165
87
1.9
86
81
9
198
17
36
14
32
1.90
11520--11544
11
2.3
11
100
0
50
84
0
16
0
0.63
25371--25406
6
6.0
6
100
0
72
33
50
0
16
1.46
32164--32237
31
2.5
29
78
10
87
32
27
13
27
1.94

Tables:   1

The End!