Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015070.1 Corchorus olitorius cultivar O-4 contig15103, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35739

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
410--442
16
2.1
16
88
11
50
42
6
6
45
1.53
2640--2666
2
13.5
2
100
0
54
48
0
0
51
1.00
4950--4980
7
4.6
7
92
8
55
0
22
0
77
0.77
4950--4981
13
2.5
13
94
0
55
0
25
0
75
0.81
5287--5330
23
1.9
23
85
0
61
50
2
4
43
1.35
5317--5351
15
2.3
15
90
5
52
40
2
5
51
1.40
9150--9194
2
23.5
2
86
8
67
46
2
0
51
1.13
22947--23090
71
2.0
71
90
0
225
43
15
12
29
1.83
25384--25415
2
16.0
2
100
0
64
50
0
0
50
1.00
27748--27806
12
4.8
12
78
13
66
54
0
1
44
1.10
27747--27806
19
3.2
19
81
13
79
55
0
1
43
1.10
28260--28294
2
17.5
2
100
0
70
48
0
0
51
1.00

Tables:   1

The End!