Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015072.1 Corchorus olitorius cultivar O-4 contig15105, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14996

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5934--6001
33
2.1
31
83
5
82
42
11
4
41
1.61
6810--6841
16
2.0
16
93
0
55
40
37
15
6
1.73
7494--7664
93
1.8
94
92
1
290
53
2
13
30
1.52
8717--8751
11
3.2
11
83
0
52
77
17
5
0
0.96
10342--10394
2
25.5
2
81
7
61
43
0
9
47
1.36
10344--10392
16
2.9
16
90
6
71
42
0
10
46
1.37
10342--10402
18
3.2
19
84
13
81
42
1
9
45
1.47
12487--12542
21
2.8
20
81
5
60
33
19
7
39
1.79

Tables:   1

The End!