Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015075.1 Corchorus olitorius cultivar O-4 contig15108, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11856

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--36
2
18.0
2
100
0
72
50
0
0
50
1.00
1931--1980
25
2.0
26
92
4
84
54
2
6
38
1.37
2110--2175
27
2.4
27
80
12
73
43
3
9
43
1.51
2516--3207
351
2.0
351
86
4
975
34
17
17
30
1.93
3314--3369
27
2.1
25
84
15
69
50
1
5
42
1.35
3489--3570
22
3.8
22
81
1
94
39
10
9
40
1.74
3490--3593
43
2.4
44
80
1
120
40
14
9
35
1.79
8497--8538
19
2.3
18
84
8
57
35
2
0
61
1.09
8941--8988
20
2.4
20
79
6
53
60
6
16
16
1.55
8932--8991
21
2.8
21
77
12
59
63
6
13
16
1.50

Tables:   1

The End!