Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015077.1 Corchorus olitorius cultivar O-4 contig15110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26030

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4073--4826
332
2.3
322
80
6
773
35
14
15
35
1.87
6479--8969
327
7.7
327
74
12
1238
33
14
16
35
1.89
13754--13785
10
3.3
10
95
4
57
93
6
0
0
0.34
14260--14369
53
2.1
53
94
0
193
50
15
8
25
1.71
17888--17915
2
14.0
2
100
0
56
50
0
0
50
1.00
21549--21597
25
2.0
25
84
8
64
40
2
0
57
1.10
23315--23344
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!