Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015079.1 Corchorus olitorius cultivar O-4 contig15112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8205

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1733--1806
30
2.6
28
87
10
107
9
37
4
48
1.55
1733--1809
26
2.7
29
90
7
106
9
36
3
50
1.52
2954--2987
16
2.0
16
88
11
50
82
0
17
0
0.67
4025--4192
93
1.8
91
90
2
273
30
12
2
53
1.53
4265--4327
28
2.3
26
81
10
72
34
12
7
44
1.72
8133--8201
22
3.1
22
83
4
95
37
18
8
34
1.82

Tables:   1

The End!